LOINCActiveObservation

LOINC Code 79388-5: Norovirus genogroup I+II orf1-orf2 junction region NAA+probe Ql (Stl)

79388-5 is a LOINC code used to identify Norovirus genogroup I+II orf1-orf2 junction region NAA+probe Ql (Stl) in laboratory and clinical observation data. You may see this code in lab systems, lab reports, EHR exports, interoperability feeds, or other structured clinical data exchanges. LOINC codes identify tests, measurements, observations, survey items, and clinical questions in a standardized way. It is associated with the component Norovirus genogroup I+II orf1-orf2 junction region. It is commonly used with the system or sample type Stool.

Reviewed by HealthAssure Clinical TeamUpdated 21 May 2026

What is this code?

LOINC codes identify tests, measurements, observations, survey items, and clinical questions in a standardized way. It is associated with the component Norovirus genogroup I+II orf1-orf2 junction region. It is commonly used with the system or sample type Stool.

When is it used?

  • Used in lab systems, EHRs, and clinical data exchange.
  • May identify a test, observation, survey item, or clinical document request rather than a diagnosis.
  • Status: ACTIVE
  • Order vs observation: Observation
  • Method: Probe.amp.tar

What it does not mean

  • The code identifies the observation or test, not the actual result.

Key facts

  • Norovirus genogroup I+II orf1-orf2 junction region [Presence] in Stool by NAA with probe detection
  • Norovirus genogroup I+II orf1-orf2 junction region
  • This assay determines the presence of Norovirus genogroup I or II based on detection of the ORF1-ORF2 junction region. The assay does not distinguish between genogroup I and II. This term was created for, but is not limited in use to, Nanosphere's Verigene Enteric Pathogens Nucleic Acid Test, which is intended for the detection and identification of common pathogenic enteric bacteria, viruses, and genetic virulence markers in stool specimens from individuals with signs and symptoms of gastrointestinal infection.
  • 2; 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; Bowel movement; DNA NUCLEIC ACID PROBE; DNA probe; Faecal; Faeces; Fecal; Feces; Human Calcivirus; ID; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+probe; NAAT; NASBA; Norov GI+II orf1-orf2 jnc; Norovirus 1; Norovirus G1; Norovirus GI; Norovirus GI + GII; Norovirus GI+II; Norwalk virus; Nucleic acid sequence based analysis; Ordinal; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Screen; SDA; Stl; Stool = Fecal; Strand Displacement Amplification; TMA; Transcription mediated amplification

Where you may see this code

You may see this code in lab systems, lab reports, EHR exports, interoperability feeds, or other structured clinical data exchanges.

Common synonyms

Norovirus genogroup I+II orf1-orf2 junction region NAA+probe Ql (Stl)Norovirus genogroup I+II orf1-orf2 junction region [Presence] in Stool by NAA with probe detectionNorov GI+II orf1-orf2 jnc Stl Ql NAA+prNorovirus genogroup I+II orf1-orf2 junction regionMICRONorovirus Genogroup I+II Orf1-orf2 Junction Region, StoolPrThr

Frequently asked questions

Code details

Code79388-5
SystemLOINC
Display nameNorovirus genogroup I+II orf1-orf2 junction region NAA+probe Ql (Stl)
DescriptionNorovirus genogroup I+II orf1-orf2 junction region
Short nameNorov GI+II orf1-orf2 jnc Stl Ql NAA+pr
ComponentNorovirus genogroup I+II orf1-orf2 junction region
PropertyPrThr
TimingPt
System (specimen)Stool
ScaleOrd
MethodProbe.amp.tar
ClassMICRO
StatusACTIVE
Order/ObservationObservation

Flags

BillableNo
Valid clinical useNo

Source

SourceLOINC
Version2.82
Releasemain
First released2.54
Last changed2.73

Consumer names

Norovirus Genogroup I+II Orf1-orf2 Junction Region, Stool

Part names

Norovirus genogroup I+II orf1-orf2 junction regionPrThrPtStoolOrdProbe.amp.tarPresence or ThresholdPoint in time (spot)Nucleic acid amplification with probe detection

About this content

This page is prepared by HealthAssure's clinical team using official coding standards from LOINC. AI tools assist with drafting explanations, which are then reviewed and verified by healthcare professionals for accuracy. This content is for informational purposes and does not replace professional medical advice. Meet our team.

LOINC Code 79388-5 | HealthAssure